Add plugin ID to skill analytics (#20923)

## Summary
- thread plugin skill roots through the skills loader with their plugin
ID
- store plugin ID on loaded skill metadata for plugin-provided skills
- include plugin ID on skill invocation analytics events

## Test plan
- cargo check -p codex-core-skills
- cargo check -p codex-core -p codex-core-plugins -p codex-analytics
- cargo check -p codex-tui
- cargo check -p codex-plugin -p codex-core -p codex-core-plugins -p
codex-analytics
- cargo check -p codex-app-server
- cargo test -p codex-analytics
- HOME=/private/tmp/codex-empty-home cargo test -p codex-core-skills
- just fix -p codex-core-skills
- just fix -p codex-analytics
- just fix -p codex-core-plugins
- just fix -p codex-core
- just fmt
- git diff --check

codex-rs/core-plugins/src/manager.rs

@@ -63,6 +63,7 @@ use codex_plugin::PluginIdError;
 use codex_plugin::prompt_safe_plugin_description;
 use codex_protocol::protocol::Product;
 use codex_utils_absolute_path::AbsolutePathBuf;
+use codex_utils_plugins::PluginSkillRoot;
 use std::collections::HashMap;
 use std::collections::HashSet;
 use std::path::PathBuf;
@@ -540,10 +541,10 @@ impl PluginsManager {
         &self,
         config_layer_stack: &ConfigLayerStack,
         config: &PluginsConfigInput,
-    ) -> Vec<AbsolutePathBuf> {
+    ) -> Vec<PluginSkillRoot> {
         self.plugins_for_layer_stack(config_layer_stack, config, config.plugin_hooks_enabled)
             .await
-            .effective_skill_roots()
+            .effective_plugin_skill_roots()
     }
 
     fn cached_enabled_outcome(
@@ -1339,6 +1340,7 @@ impl PluginsManager {
         );
         let resolved_skills = load_plugin_skills(
             &source_path,
+            &plugin_id,
             &manifest.paths,
             self.restriction_product,
             &codex_core_skills::config_rules::skill_config_rules_from_stack(