## What changed
- Recognize root `plugin.json` files using the Agent Plugins 1.0 schema and map their portable metadata, `skills/`, and `mcp.json` into Codex plugin manifests.
- Apply Codex-specific apps, hooks, and interface settings from the inline `com.openai` extension, with `.codex-plugin/plugin.json` as a fallback overlay.
- Preserve legacy manifest precedence when a root `plugin.json` is unrelated, and reject unsupported Agent Plugins schema versions.
- Add a direct-child skill discovery mode that excludes nested skills and paths resolving outside the plugin root.
## Testing
- Cover manifest metadata, validation, extension precedence, legacy fallback, and direct-child skill path boundaries.
GitOrigin-RevId: eab24139f13a5cc5cb3ad3fb444d8e904511aca6
## Why
Config layer provenance describes how effective configuration was
assembled, so it belongs with the config loader rather than in
app-server's serialized API types.
## What changed
- Moved `ConfigLayerSource`, `ConfigLayerMetadata`, and `ConfigLayer`
ownership into `codex-config`.
- Kept app-server's wire payloads unchanged and added explicit
conversions at the app boundary.
- Removed lower-level app-server-protocol dependencies from config
consumers.
## Stack
This is PR 3 of 6, stacked on [PR
#29721](https://github.com/openai/codex/pull/29721). Review only the
delta from `codex/split-auth-domain-types`. Next: [PR
#29723](https://github.com/openai/codex/pull/29723).
## Validation
- `codex-config` coverage passed.
- App-server config-manager and config RPC coverage passed.
## What changed
- retain the parsed plugin manifest namespace on loaded plugins
- carry that namespace through `PluginSkillRoot` and `SkillRoot`
- use the provided namespace when qualifying plugin skill names
- include the namespace in the skills cache key
## Why
Plugin loading has already parsed `plugin.json`, but skill parsing
currently walks every `SKILL.md` ancestor and probes/reads the manifest
again to reconstruct the same namespace. Passing the parsed namespace
removes those repeated filesystem calls, which are particularly costly
on remote filesystems.
Context:
https://openai.slack.com/archives/C0ARA9GF5D4/p1781639496496439?thread_ts=1781202444.891669&cid=C0ARA9GF5D4
## Impact
Plugin skill names remain unchanged. A regression test uses a
deliberately different on-disk manifest name to verify that plugin roots
use the provided parsed namespace.
## Validation
- `just test -p codex-core-skills -p codex-core-plugins -p codex-plugin
-p codex-utils-plugins` (352 passed)
- `just fix -p codex-core-skills -p codex-core-plugins -p codex-plugin
-p codex-utils-plugins`
- `just fmt`
## Why
Host skill discovery was still exposed as a manager even though it is a
process-owned service shared by sessions, the app-server catalog, and
file-watcher invalidation. The skills extension also consumed an ad hoc
loaded-skills wrapper instead of a named immutable snapshot.
## What changed
- replace `SkillsManager` with concrete `SkillsService`
- make the service cache and return immutable `HostSkillsSnapshot`
values
- migrate the skills extension host provider to the snapshot boundary
- migrate app-server catalog, watcher, and invalidation paths to the
service
This keeps the service limited to host discovery, caching, roots, and
invalidation. Catalog rendering and invocation remain extension
responsibilities for the next stacked change.